Skip to main content

Module bindings

Module bindings 

Source
Expand description

Python bindings for spike-train and neural-signal analysis.

Functionsยง

__pyfunction_py_adaptive_spike_distance ๐Ÿ”’ โš 
__pyfunction_py_amplitude_cutoff ๐Ÿ”’ โš 
__pyfunction_py_approximate_entropy ๐Ÿ”’ โš 
__pyfunction_py_autocorrelation_time ๐Ÿ”’ โš 
__pyfunction_py_bayesian_decode ๐Ÿ”’ โš 
__pyfunction_py_bin_spike_train ๐Ÿ”’ โš 
__pyfunction_py_burst_detection ๐Ÿ”’ โš 
__pyfunction_py_cell_assembly_detection ๐Ÿ”’ โš 
__pyfunction_py_change_point_detection ๐Ÿ”’ โš 
__pyfunction_py_coincidence_index ๐Ÿ”’ โš 
__pyfunction_py_compound_poisson_process ๐Ÿ”’ โš 
__pyfunction_py_conditional_granger_causality ๐Ÿ”’ โš 
__pyfunction_py_conditional_intensity ๐Ÿ”’ โš 
__pyfunction_py_covariance_matrix ๐Ÿ”’ โš 
__pyfunction_py_cross_correlation ๐Ÿ”’ โš 
__pyfunction_py_cubic_higher_order ๐Ÿ”’ โš 
__pyfunction_py_cv2 ๐Ÿ”’ โš 
__pyfunction_py_cv_isi ๐Ÿ”’ โš 
__pyfunction_py_d_prime ๐Ÿ”’ โš 
__pyfunction_py_demixed_components ๐Ÿ”’ โš 
__pyfunction_py_demixed_pca ๐Ÿ”’ โš 
__pyfunction_py_directed_transfer_function ๐Ÿ”’ โš 
__pyfunction_py_drift_metric ๐Ÿ”’ โš 
__pyfunction_py_earth_movers_distance ๐Ÿ”’ โš 
__pyfunction_py_event_synchronization ๐Ÿ”’ โš 
__pyfunction_py_factor_analysis ๐Ÿ”’ โš 
__pyfunction_py_factor_loadings ๐Ÿ”’ โš 
__pyfunction_py_fano_factor ๐Ÿ”’ โš 
__pyfunction_py_firing_rate ๐Ÿ”’ โš 
__pyfunction_py_first_spike_latency ๐Ÿ”’ โš 
__pyfunction_py_functional_connectivity ๐Ÿ”’ โš 
__pyfunction_py_gamma_process ๐Ÿ”’ โš 
__pyfunction_py_gaussian_attention ๐Ÿ”’ โš 
__pyfunction_py_gpfa ๐Ÿ”’ โš 
__pyfunction_py_gpfa_em ๐Ÿ”’ โš 
__pyfunction_py_gpfa_transform ๐Ÿ”’ โš 
__pyfunction_py_homogeneous_poisson ๐Ÿ”’ โš 
__pyfunction_py_hunter_milton_similarity ๐Ÿ”’ โš 
__pyfunction_py_hurst_exponent ๐Ÿ”’ โš 
__pyfunction_py_infonce_loss ๐Ÿ”’ โš 
__pyfunction_py_instantaneous_rate ๐Ÿ”’ โš 
__pyfunction_py_isi ๐Ÿ”’ โš 
__pyfunction_py_isi_distance ๐Ÿ”’ โš 
__pyfunction_py_isi_hazard_function ๐Ÿ”’ โš 
__pyfunction_py_isi_profile ๐Ÿ”’ โš 
__pyfunction_py_isi_survivor_function ๐Ÿ”’ โš 
__pyfunction_py_isi_violation_rate ๐Ÿ”’ โš 
__pyfunction_py_isolation_distance ๐Ÿ”’ โš 
__pyfunction_py_joint_psth ๐Ÿ”’ โš 
__pyfunction_py_kozachenko_leonenko_mi ๐Ÿ”’ โš 
__pyfunction_py_l_ratio ๐Ÿ”’ โš 
__pyfunction_py_lempel_ziv_complexity ๐Ÿ”’ โš 
__pyfunction_py_linear_discriminant_decode ๐Ÿ”’ โš 
__pyfunction_py_local_variation ๐Ÿ”’ โš 
__pyfunction_py_maximum_likelihood_decode ๐Ÿ”’ โš 
__pyfunction_py_multi_neuron_victor_purpura ๐Ÿ”’ โš 
__pyfunction_py_mutual_information ๐Ÿ”’ โš 
__pyfunction_py_naive_bayes_decode ๐Ÿ”’ โš 
__pyfunction_py_nn_hit_rate ๐Ÿ”’ โš 
__pyfunction_py_noise_correlation ๐Ÿ”’ โš 
__pyfunction_py_noise_entropy ๐Ÿ”’ โš 
__pyfunction_py_pairwise_correlation ๐Ÿ”’ โš 
__pyfunction_py_pairwise_granger_causality ๐Ÿ”’ โš 
__pyfunction_py_partial_directed_coherence ๐Ÿ”’ โš 
__pyfunction_py_pca_components ๐Ÿ”’ โš 
__pyfunction_py_permutation_entropy ๐Ÿ”’ โš 
__pyfunction_py_phase_locking_value ๐Ÿ”’ โš 
__pyfunction_py_place_field_detection ๐Ÿ”’ โš 
__pyfunction_py_population_vector_decode ๐Ÿ”’ โš 
__pyfunction_py_power_spectrum ๐Ÿ”’ โš 
__pyfunction_py_presence_ratio ๐Ÿ”’ โš 
__pyfunction_py_psth ๐Ÿ”’ โš 
__pyfunction_py_renewal_density ๐Ÿ”’ โš 
__pyfunction_py_response_onset ๐Ÿ”’ โš 
__pyfunction_py_sample_entropy ๐Ÿ”’ โš 
__pyfunction_py_scaled_dot_product_attention ๐Ÿ”’ โš 
__pyfunction_py_schreiber_similarity ๐Ÿ”’ โš 
__pyfunction_py_signal_correlation ๐Ÿ”’ โš 
__pyfunction_py_silhouette_score ๐Ÿ”’ โš 
__pyfunction_py_sinusoidal_position_encode ๐Ÿ”’ โš 
__pyfunction_py_snr ๐Ÿ”’ โš 
__pyfunction_py_spade_detect ๐Ÿ”’ โš 
__pyfunction_py_spatial_information ๐Ÿ”’ โš 
__pyfunction_py_spectral_granger_causality ๐Ÿ”’ โš 
__pyfunction_py_spike_count ๐Ÿ”’ โš 
__pyfunction_py_spike_count_covariance ๐Ÿ”’ โš 
__pyfunction_py_spike_directionality ๐Ÿ”’ โš 
__pyfunction_py_spike_distance ๐Ÿ”’ โš 
__pyfunction_py_spike_distance_matrix ๐Ÿ”’ โš 
__pyfunction_py_spike_field_coherence ๐Ÿ”’ โš 
__pyfunction_py_spike_phase_histogram ๐Ÿ”’ โš 
__pyfunction_py_spike_profile ๐Ÿ”’ โš 
__pyfunction_py_spike_sync ๐Ÿ”’ โš 
__pyfunction_py_spike_sync_profile ๐Ÿ”’ โš 
__pyfunction_py_spike_time_tiling_coefficient ๐Ÿ”’ โš 
__pyfunction_py_spike_times ๐Ÿ”’ โš 
__pyfunction_py_spike_train_coherence ๐Ÿ”’ โš 
__pyfunction_py_spike_train_entropy ๐Ÿ”’ โš 
__pyfunction_py_spike_train_order ๐Ÿ”’ โš 
__pyfunction_py_spike_train_pca ๐Ÿ”’ โš 
__pyfunction_py_spike_triggered_average ๐Ÿ”’ โš 
__pyfunction_py_spike_triggered_covariance ๐Ÿ”’ โš 
__pyfunction_py_stimulus_specific_information ๐Ÿ”’ โš 
__pyfunction_py_surrogate_bin_shuffling ๐Ÿ”’ โš 
__pyfunction_py_surrogate_dither ๐Ÿ”’ โš 
__pyfunction_py_surrogate_isi_shuffle ๐Ÿ”’ โš 
__pyfunction_py_surrogate_joint_isi ๐Ÿ”’ โš 
__pyfunction_py_surrogate_spike_train_shifting ๐Ÿ”’ โš 
__pyfunction_py_synfire_chain_detection ๐Ÿ”’ โš 
__pyfunction_py_tokenise_spikes ๐Ÿ”’ โš 
__pyfunction_py_transfer_entropy ๐Ÿ”’ โš 
__pyfunction_py_tuning_curve ๐Ÿ”’ โš 
__pyfunction_py_unitary_events ๐Ÿ”’ โš 
__pyfunction_py_van_rossum_distance ๐Ÿ”’ โš 
__pyfunction_py_victor_purpura_distance ๐Ÿ”’ โš 
__pyfunction_py_waveform_amplitude ๐Ÿ”’ โš 
__pyfunction_py_waveform_halfwidth ๐Ÿ”’ โš 
__pyfunction_py_waveform_pt_ratio ๐Ÿ”’ โš 
__pyfunction_py_waveform_recovery_slope ๐Ÿ”’ โš 
__pyfunction_py_waveform_repolarization_slope ๐Ÿ”’ โš 
__pyfunction_py_waveform_width ๐Ÿ”’ โš 
py_adaptive_spike_distance ๐Ÿ”’
py_amplitude_cutoff ๐Ÿ”’
py_approximate_entropy ๐Ÿ”’
py_autocorrelation_time ๐Ÿ”’
py_bayesian_decode ๐Ÿ”’
py_bin_spike_train ๐Ÿ”’
py_burst_detection ๐Ÿ”’
py_cell_assembly_detection ๐Ÿ”’
py_change_point_detection ๐Ÿ”’
py_coincidence_index ๐Ÿ”’
py_compound_poisson_process ๐Ÿ”’
py_conditional_granger_causality ๐Ÿ”’
py_conditional_intensity ๐Ÿ”’
py_covariance_matrix ๐Ÿ”’
py_cross_correlation ๐Ÿ”’
py_cubic_higher_order ๐Ÿ”’
py_cv2 ๐Ÿ”’
py_cv_isi ๐Ÿ”’
py_d_prime ๐Ÿ”’
py_demixed_components ๐Ÿ”’
py_demixed_pca ๐Ÿ”’
py_directed_transfer_function ๐Ÿ”’
py_drift_metric ๐Ÿ”’
py_earth_movers_distance ๐Ÿ”’
py_event_synchronization ๐Ÿ”’
py_factor_analysis ๐Ÿ”’
py_factor_loadings ๐Ÿ”’
py_fano_factor ๐Ÿ”’
py_firing_rate ๐Ÿ”’
py_first_spike_latency ๐Ÿ”’
py_functional_connectivity ๐Ÿ”’
py_gamma_process ๐Ÿ”’
py_gaussian_attention ๐Ÿ”’
py_gpfa ๐Ÿ”’
py_gpfa_em ๐Ÿ”’
Run the GPFA EM loop from a caller-supplied deterministic initialisation.
py_gpfa_transform ๐Ÿ”’
py_homogeneous_poisson ๐Ÿ”’
py_hunter_milton_similarity ๐Ÿ”’
py_hurst_exponent ๐Ÿ”’
py_infonce_loss ๐Ÿ”’
py_instantaneous_rate ๐Ÿ”’
py_isi ๐Ÿ”’
py_isi_distance ๐Ÿ”’
py_isi_hazard_function ๐Ÿ”’
py_isi_profile ๐Ÿ”’
py_isi_survivor_function ๐Ÿ”’
py_isi_violation_rate ๐Ÿ”’
py_isolation_distance ๐Ÿ”’
py_joint_psth ๐Ÿ”’
py_kozachenko_leonenko_mi ๐Ÿ”’
py_l_ratio ๐Ÿ”’
py_lempel_ziv_complexity ๐Ÿ”’
py_linear_discriminant_decode ๐Ÿ”’
py_local_variation ๐Ÿ”’
py_maximum_likelihood_decode ๐Ÿ”’
py_multi_neuron_victor_purpura ๐Ÿ”’
py_mutual_information ๐Ÿ”’
py_naive_bayes_decode ๐Ÿ”’
py_nn_hit_rate ๐Ÿ”’
py_noise_correlation ๐Ÿ”’
py_noise_entropy ๐Ÿ”’
py_pairwise_correlation ๐Ÿ”’
py_pairwise_granger_causality ๐Ÿ”’
py_partial_directed_coherence ๐Ÿ”’
py_pca_components ๐Ÿ”’
py_permutation_entropy ๐Ÿ”’
py_phase_locking_value ๐Ÿ”’
py_place_field_detection ๐Ÿ”’
py_population_vector_decode ๐Ÿ”’
py_power_spectrum ๐Ÿ”’
py_presence_ratio ๐Ÿ”’
py_psth ๐Ÿ”’
py_renewal_density ๐Ÿ”’
py_response_onset ๐Ÿ”’
py_sample_entropy ๐Ÿ”’
py_scaled_dot_product_attention ๐Ÿ”’
py_schreiber_similarity ๐Ÿ”’
py_signal_correlation ๐Ÿ”’
py_silhouette_score ๐Ÿ”’
py_sinusoidal_position_encode ๐Ÿ”’
py_snr ๐Ÿ”’
py_spade_detect ๐Ÿ”’
py_spatial_information ๐Ÿ”’
py_spectral_granger_causality ๐Ÿ”’
py_spike_count ๐Ÿ”’
py_spike_count_covariance ๐Ÿ”’
py_spike_directionality ๐Ÿ”’
py_spike_distance ๐Ÿ”’
py_spike_distance_matrix ๐Ÿ”’
py_spike_field_coherence ๐Ÿ”’
py_spike_phase_histogram ๐Ÿ”’
py_spike_profile ๐Ÿ”’
py_spike_sync ๐Ÿ”’
py_spike_sync_profile ๐Ÿ”’
py_spike_time_tiling_coefficient ๐Ÿ”’
py_spike_times ๐Ÿ”’
py_spike_train_coherence ๐Ÿ”’
py_spike_train_entropy ๐Ÿ”’
py_spike_train_order ๐Ÿ”’
py_spike_train_pca ๐Ÿ”’
py_spike_triggered_average ๐Ÿ”’
py_spike_triggered_covariance ๐Ÿ”’
py_stimulus_specific_information ๐Ÿ”’
py_surrogate_bin_shuffling ๐Ÿ”’
py_surrogate_dither ๐Ÿ”’
py_surrogate_isi_shuffle ๐Ÿ”’
py_surrogate_joint_isi ๐Ÿ”’
py_surrogate_spike_train_shifting ๐Ÿ”’
py_synfire_chain_detection ๐Ÿ”’
py_tokenise_spikes ๐Ÿ”’
py_transfer_entropy ๐Ÿ”’
py_tuning_curve ๐Ÿ”’
py_unitary_events ๐Ÿ”’
py_van_rossum_distance ๐Ÿ”’
py_victor_purpura_distance ๐Ÿ”’
py_waveform_amplitude ๐Ÿ”’
py_waveform_halfwidth ๐Ÿ”’
py_waveform_pt_ratio ๐Ÿ”’
py_waveform_recovery_slope ๐Ÿ”’
py_waveform_repolarization_slope ๐Ÿ”’
py_waveform_width ๐Ÿ”’
register ๐Ÿ”’
Register the analysis functions on the Python extension module.